Protein Alignment C15 and Hoxd10

DIOPT Version :10

• Sequence 1: NP_476873.2
• Gene: C15 / 42544
• FlyBaseID: FBgn0004863
• Length: 339
• Species: Drosophila melanogaster
• Sequence 2: XP_006498852.1
• Gene: Hoxd10 / 15430
• MGIID: 96202
• Length: 410
• Species: Mus musculus
• Alignment Length: 307
• Identity: 74/307 - (24%)
• Similarity: 108/307 - (35%)
• Gaps: 66/307 - (21%)

  Fly    11 HENEHGEEVEEQEIHVDVDSDSRMSCGSGSDVDMDGGSC--------------YDE-------SE 54
            |:| .|..|......||..:|...||.....|.....:|              |.:       :|
Mouse   134 HQN-MGMNVHPYIPQVDSWTDPNRSCRIEQPVTQQVPTCSFTANIKEESNCCMYSDKRNKLISAE 197

  Fly    55 TPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEE 119
            .|..:.|..|.....:.| :|......||:.:.|......||     |..|||:.......:|..
Mouse   198 VPSYQRLVPESCPVENPE-VPVPGYFRLSQTYATGKTQEYNN-----SPEGSSTVMLQLNPRGAA 256

  Fly   120 KELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHA 184
            |..|                     |||.|.....:..||:|....:|....:|......|...:
Mouse   257 KPQL---------------------SAAQLQMEKKMNESASGQEPTKVSQVESPEAKGGLPEDRS 300

  Fly   185 ALAHQAV----------KDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQ 239
            .||..:|          |:.:.:..|.:..:       |....:|.|..:|:.|..||||.|...
Mouse   301 CLAEVSVSSPEVQEKESKEEIKSDTPTSNWL-------TAKSGRKKRCPYTKHQTLELEKEFLFN 358

  Fly   240 KYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQA 286
            .||....|..:::.:.:||.|||.||||||.|.::.:.|.|..|..|
Mouse   359 MYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRENRIRELTA 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
C15	NP_476873.2	COG5576	<196..315	CDD:227863	30/91 (33%)
		Homeodomain	218..274	CDD:459649	24/55 (44%)
Hoxd10	XP_006498852.1	Homeodomain	337..393	CDD:459649	24/55 (44%)