DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Hoxb7

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_034590.2 Gene:Hoxb7 / 15415 MGIID:96188 Length:217 Species:Mus musculus


Alignment Length:157 Identity:53/157 - (33%)
Similarity:73/157 - (46%) Gaps:26/157 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SAAALYSYPH-LYPSAAGGHVLRVPPQRTPLTWALP--PLHHAALAHQAVKDRLAAA-FPIARRI 205
            |||.:|:..: |.||:...|   ..|....|:...|  |...|....|...|..|.: |.|    
Mouse    69 SAAGVYAAGYGLEPSSFNMH---CAPFEQNLSGVCPGDPAKAAGAKEQRDSDLAAESNFRI---- 126

  Fly   206 GHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRT 270
             :|:...:.|.||:.|.::||.|..||||.||..:||....|..:|..|.:|:.|:|.||||||.
Mouse   127 -YPWMRSSGPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRM 190

  Fly   271 KWRRQT--------------AEEREAE 283
            ||:::.              |||.|.|
Mouse   191 KWKKENKTSGPGTTGQDKAEAEEEEEE 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 38/103 (37%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
Hoxb7NP_034590.2 Antp-type hexapeptide 126..131 2/9 (22%)
Homeodomain 138..194 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..217 5/24 (21%)

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