DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Hoxa7

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001406200.1 Gene:Hoxa7 / 15404 MGIID:96179 Length:270 Species:Mus musculus


Alignment Length:126 Identity:42/126 - (33%)
Similarity:60/126 - (47%) Gaps:23/126 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 PPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTP------PKRKKPRTSFTRIQVAELEKRFH 237
            ||   .:|.|...:             || :||...      |.||:.|.::||.|..||||.||
Mouse   143 PP---GSLTHHCTR-------------GH-FQNGAEANGTEGPDRKRGRQTYTRYQTLELEKEFH 190

  Fly   238 KQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEA 298
            ..:||....|..:|..|.:|:.|:|.||||||.||:::..:|.:|...|....:.|:...|
Mouse   191 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKDESQAPTAAPEDAVPSVSTAA 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 38/109 (35%)
Homeodomain 218..274 CDD:459649 27/55 (49%)
Hoxa7NP_001406200.1 Homeodomain 171..227 CDD:459649 27/55 (49%)

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