DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Gbx2

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_034392.1 Gene:Gbx2 / 14472 MGIID:95668 Length:348 Species:Mus musculus


Alignment Length:234 Identity:56/234 - (23%)
Similarity:88/234 - (37%) Gaps:58/234 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 MDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSS 108
            :.||..:|::|...:::...:...:.....|.||.:..:......:......:...:...|    
Mouse   132 LPGGGNFDKAEALQADAEDGKAFLAKEGSLLAFSAAEAVQASLVGAVRGQGKDESKVEDDP---- 192

  Fly   109 NNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVPPQRTP 173
                   ||:|:....:.|.|.      |..::..|..|.....|        ||.|...||.. 
Mouse   193 -------KGKEESFSLESDVDY------SSDDNLPGQTAHKEEDP--------GHALEETPQSG- 235

  Fly   174 LTWALPPLHHAALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHK 238
                                            |......:..|.::.||:||..|:.||||.||.
Mouse   236 --------------------------------GAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHC 268

  Fly   239 QKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTA 277
            :|||:..||:.:|..||:::.|||.||||||.||:|..|
Mouse   269 KKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKA 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 34/82 (41%)
Homeodomain 218..274 CDD:459649 30/55 (55%)
Gbx2NP_034392.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 17/129 (13%)
Homeodomain 248..304 CDD:459649 30/55 (55%)
Blue background indicates that the domain is not in the aligned region.

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