DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Dbx1

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_001005232.1 Gene:Dbx1 / 13172 MGIID:94867 Length:335 Species:Mus musculus


Alignment Length:246 Identity:76/246 - (30%)
Similarity:106/246 - (43%) Gaps:41/246 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TP---LSESLQSEQTRSSS--SENL------PFSISR-----LLSKPFETSHHHHNNNNHLLSSS 103
            ||   |.:||||..:..||  .|:|      |..:||     .||.|.:.:.....::......|
Mouse    20 TPTLTLPQSLQSAFSGHSSFLVEDLIRISRPPTYLSRSIPAASLSPPSQEAPAALADSGTSDLGS 84

  Fly   104 PGSSSNNNNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPSAAGGHVLRVP 168
            |||.|...:|.:              .|...|:......:|..|.|.|.|....|.|   :|:.|
Mouse    85 PGSGSRRGSSPQ--------------TALSPASEPTFLKFGVNAILSSAPRRETSPA---LLQSP 132

  Fly   169 PQRTPLTWALPPLHHA--ALAHQAVKDRLAAAFPIARRIGHPYQNRTPPKRKKPRTS-FTRIQVA 230
            |   |.|:|.|....:  .....:.....::..||......|...|..|:|...|.: |:.:|..
Mouse   133 P---PKTFAFPYFEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRK 194

  Fly   231 ELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEERE 281
            .|||.|.||||::..:|..||..|.:.|:|||.||||||.|||  .::|||
Mouse   195 ALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWR--NSKERE 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 37/87 (43%)
Homeodomain 218..274 CDD:459649 27/56 (48%)
Dbx1NP_001005232.1 PRK12323 <49..182 CDD:481241 34/152 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..102 10/57 (18%)
Homeodomain 184..238 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..335 3/4 (75%)

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