DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and Barhl1

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:NP_476450.1 Gene:Barhl1 / 117232 RGDID:620648 Length:327 Species:Rattus norvegicus


Alignment Length:340 Identity:103/340 - (30%)
Similarity:144/340 - (42%) Gaps:79/340 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DSRMSCGSGSDVDMDGGSCYDESETPLSESLQSEQTRSSSSENLPFSISRLLSKPFETSHHHHNN 95
            ||.:|..:||.....|.....:..:||..|.:||   |||..:.|.|..|   ...|||      
  Rat    10 DSILSHRAGSPALPKGDPLLGDCRSPLELSPRSE---SSSDCSSPASPGR---DCLETS------ 62

  Fly    96 NNHLLSSSPGSSSNN--NNSGEKGEEKELLQQEDHDLAYKLATSIANSTYGSAAALYSYPHLYPS 158
                 :|.||::|..  ::..:.|:.....|......::.:...:|:....:|.|.||... .|:
  Rat    63 -----TSRPGAASGPGLDSHLQPGQLSAPAQSRTVTSSFLIRDILADCKPLAACAPYSSSG-QPA 121

  Fly   159 A--AGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRLAAAFPIA-------------RRIGHP 208
            |  .||.:                   ||.|.:..:|:|..:...|             |.|.. 
  Rat   122 APEPGGRL-------------------AAKAGEDFRDKLDKSVSSASSDSEYKVKEEGDREISS- 166

  Fly   209 YQNRTPPKR-KKP---RTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRR 269
             ...:||.| |||   ||:||..|:|:||:.|.:||||:..:|..||..|.:||.|||||:||||
  Rat   167 -SRDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRR 230

  Fly   270 TKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAP--------PSAPLGSQGGVNGAPLA---- 322
            |||:||||...|...:|.|  ..:||....|..|.|        |.|.|....|.:..|.|    
  Rat   231 TKWKRQTAVGLELLAEAGN--YSALQRMFPSPYFYPQSLVSNLDPGAALYLYRGPSAPPPALQRP 293

  Fly   323 -----ALHGLQPWAE 332
                 .:||||..:|
  Rat   294 LVPRILIHGLQGASE 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 55/143 (38%)
Homeodomain 218..274 CDD:459649 34/58 (59%)
Barhl1NP_476450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 26/96 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..181 20/89 (22%)
Homeodomain 179..235 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..327 3/6 (50%)

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