DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and tlx1

DIOPT Version :9

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_002936814.1 Gene:tlx1 / 100494864 XenbaseID:XB-GENE-485834 Length:311 Species:Xenopus tropicalis


Alignment Length:309 Identity:132/309 - (42%)
Similarity:164/309 - (53%) Gaps:62/309 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SHHHHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDL------AYKLAT-SIANSTYG-- 144
            :||.|..:...:|.......||.:.|........||..|:.|      ||...| :.:||..|  
 Frog     6 AHHIHQTHAEPISFGIDQILNNPDQGSCMISGPRLQDSDYGLGCIVSSAYNTMTGNYSNSGTGGY 70

  Fly   145 --SAAALYSYPHLYP------------SAAGGHVLRVPPQR-------TPLTWALPPLHHAALAH 188
              ||.::.|....|.            ::||  |:|||..|       .|::..:|.:......:
 Frog    71 SNSACSMASLTGSYNMNMGVTMNGNNLNSAG--VIRVPAHRPLATSVHQPISTGMPTVPSVGSMN 133

  Fly   189 -----------------QAVKDRLAAA---FPIARRIGHPYQNRTPPKRKKPRTSFTRIQVAELE 233
                             :..|||...|   |.:.||||||||||||||:|||||||||:|:.|||
 Frog   134 NMNNLTGLTFPWMESNRRYTKDRFTVALSPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELE 198

  Fly   234 KRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEA 298
            ||||:|||||||||||||:.||||||||||||||||||||||||||||||||.|||::|.||.||
 Frog   199 KRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEA 263

  Fly   299 ISKGFAPPSAPLGSQGGVNGAPLAALHGLQPWAE--------ASHAAGC 339
            ..|....|..|  ....::.:.|.||..||||::        .|.|:.|
 Frog   264 FQKTINQPLQP--DPICLHNSSLYALQNLQPWSDDMSKITSVTSVASAC 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 89/121 (74%)
Homeobox 220..273 CDD:278475 46/52 (88%)
tlx1XP_002936814.1 Homeobox 185..239 CDD:365835 47/53 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6169
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 202 1.000 Inparanoid score I3650
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1391465at2759
OrthoFinder 1 1.000 - - FOG0001097
OrthoInspector 1 1.000 - - otm47612
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5132
SonicParanoid 1 1.000 - - X1533
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.090

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