DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and hlx

DIOPT Version :9

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_004914850.1 Gene:hlx / 100488508 XenbaseID:XB-GENE-483226 Length:397 Species:Xenopus tropicalis


Alignment Length:256 Identity:70/256 - (27%)
Similarity:102/256 - (39%) Gaps:57/256 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 SENLPFSISRLLSKPFETSHHHHNNNNHLLSSSPGSSSNNNNSGEKGEEKELLQQEDHDLA---- 131
            |::|.|.|.|:||..|:......|....|.|    ..|....||..|:..:  ....|..|    
 Frog   133 SKDLKFGIDRILSAEFDPKVKEGNTLRDLTS----LISAGQQSGLPGQHMQ--STAGHFFAPLEP 191

  Fly   132 YKLATSIANSTYGS-AAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALAHQAVKDRL 195
            ...|:|:.....|| .:::..:...:|...         .|....|.    .:|.|    .||.:
 Frog   192 LGEASSLLGQLNGSQRSSVQQFQDTFPGDG---------SRKLYMWG----PYAVL----TKDTM 239

  Fly   196 AAAFPIARRIGHPYQNRTPPKRKK--PRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTD 258
            ...:                |||:  .|..|:.:|...|||||..|||:...:|..||..|.:||
 Frog   240 PQTY----------------KRKRSWSRAVFSNLQRKGLEKRFEVQKYVTKPDRKQLAAMLGLTD 288

  Fly   259 AQVKTWFQNRRTKWR--RQTAEEREAERQAANRLMLSLQAEAISKG---FAPPSAPLGSQG 314
            ||||.||||||.|||  ::...:::.|::.|.:      .||...|   ....|:|..|:|
 Frog   289 AQVKVWFQNRRMKWRHSKEAQAQKDKEKEEAEK------PEAPGSGEVQMDRSSSPYRSEG 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 42/126 (33%)
Homeobox 220..273 CDD:278475 28/52 (54%)
hlxXP_004914850.1 Homeobox 250..304 CDD:365835 29/53 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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