DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and LOC100486032

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_002934006.1 Gene:LOC100486032 / 100486032 XenbaseID:XB-GENE-29078139 Length:255 Species:Xenopus tropicalis


Alignment Length:91 Identity:25/91 - (27%)
Similarity:37/91 - (40%) Gaps:15/91 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 NGTATLL--FEYRANPIESITSRCAFGWIATTQFCIAPVERRLP----WQEAEAECNRLGGHLMS 367
            ||...||  .|:|..|:..|.|...||..|....|...:...:|    ..||:.       ||::
 Frog    46 NGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPDLGTMSEAKP-------HLIT 103

  Fly   368 --IRSSEDQQLIDQLLFNSPGYKDDN 391
              ..|...:::.|.|.:..|..|||:
 Frog   104 HGFSSRLGKRVSDILRYLFPVPKDDS 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 2/5 (40%)
Homeodomain 218..274 CDD:459649
LOC100486032XP_002934006.1 Homeodomain 125..181 CDD:459649 3/5 (60%)
Blue background indicates that the domain is not in the aligned region.

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