DRSC/TRiP Functional Genomics Resources

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Protein Alignment C15 and tlx3a

DIOPT Version :10

Sequence 1:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster
Sequence 2:XP_003199819.1 Gene:tlx3a / 100008066 ZFINID:ZDB-GENE-080724-11 Length:251 Species:Danio rerio


Alignment Length:203 Identity:116/203 - (57%)
Similarity:137/203 - (67%) Gaps:31/203 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 YGSAAALYSYPHLYPSAAGGHVLRVPPQRTPLTWALPPLHHAALA---------HQAVKDRLAAA 198
            :|.::||..          |.|:|||..| ||.   |.:..||.|         .:..||||.|.
Zfish    58 FGVSSALLP----------GGVIRVPAHR-PLA---PAMMSAAPALCFPWMDNNRRFPKDRLPAL 108

  Fly   199 FP--IARRIGHPYQNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQV 261
            .|  :.||||||||||||||||||||||:|:|:.|||||||:|||||||||||||:.||||||||
Zfish   109 IPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQV 173

  Fly   262 KTWFQNRRTKWRRQTAEEREAERQAANRLMLSLQAEAISKGFAP--PSAPLGSQGGVNGAPLAAL 324
            |||||||||||||||||||||.||.|||::|.|||:|:.|..:.  .|.||    .::.:.|.||
Zfish   174 KTWFQNRRTKWRRQTAEEREAGRQQANRMLLQLQADALQKSISESVSSDPL----CLHNSSLYAL 234

  Fly   325 HGLQPWAE 332
            ..|||||:
Zfish   235 QNLQPWAQ 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C15NP_476873.2 COG5576 <196..315 CDD:227863 89/122 (73%)
Homeodomain 218..274 CDD:459649 48/55 (87%)
tlx3aXP_003199819.1 Homeodomain 130..186 CDD:459649 48/55 (87%)

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