Sequence 1: | NP_001262806.1 | Gene: | Fancm / 42543 | FlyBaseID: | FBgn0038889 | Length: | 1489 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258211.1 | Gene: | DICER1 / 23405 | HGNCID: | 17098 | Length: | 1922 | Species: | Homo sapiens |
Alignment Length: | 1766 | Identity: | 316/1766 - (17%) |
---|---|---|---|
Similarity: | 585/1766 - (33%) | Gaps: | 649/1766 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 GHNW----IYPNNLPLRSYQQTIVQSALFKNTLVVLPTGLGKTFIAAV--------VMYNFYRWY 99
Fly 100 PKGK-IVFMAPTRPLVSQQI-----HASQKIMPFPSEDTVQLTGQLPRPKRAELWASKRVFFATP 158
Fly 159 QVVHSDMLEADGECSFPFGSIKLIVVDEAHRAKGRYAYTQVADCLMARNRYFRMLALSAT----- 218
Fly 219 -PGRTMEDVAAVCRNLYISNLQVRWD-------TS------IDVQPYIHRRTIRTIVVSLKERIK 269
Fly 270 EPRERLLQIIEPYLRQLMEAEIFKGNKGTVSRNSLLFEQKSFVERSAQGQRHPDHNIIMGNFAMC 334
Fly 335 ISMYHSLDLMERHGLRVFVNNFDADDDGREKFVLARDGNLRNLVEQVRQELGANPLDYTTHAMTN 399
Fly 400 GEVPPLPSDLDFGHAKYEKLRQVL-------VQHFQA---------------------------- 429
Fly 430 ---NPDSR----------AIVFCEYRESVMLIHRLLLQ---HRPVLRPRCFVGQGSTVGASYALT 478
Fly 479 Q----------KQQLQIMTDFRSGTSNVLVATSIGEEGLDVGEVEMIVCFDICSTNPTR---FIQ 530
Fly 531 RIGRTGRKKNGEVVMLVTEG--------REQQVLKDVLANK------------------------ 563
Fly 564 ------DQINKKLLNSSVVKLSLY-EQNPRMVPSKFQPKCE------------------------ 597
Fly 598 ------------------------------EKHMEPVAEEKPK---------------PKSAAKT 617
Fly 618 KESRKRKQPVAQTGSLRKYF-----------------------------KESPPTESQQ--GILQ 651
Fly 652 GIKPYQMSEASQQLVKQQVLRRSVTLKNFFGESQASSTLTSS--QEDVQRLRKLTRL-------- 706
Fly 707 LQSSKP-------------------FVSDSK--DLMSHLQDDHLPRQIKLYLLKSNPEFLRETHL 750
Fly 751 KMQVQSELNIADDRLNSRQRRTKNNYQ--LLLDICDGMDQMNELLQGDNSGAEISFRDELNPIYN 813
Fly 814 QSPKKFDTICEQIFDGLNEHGLNSNNFELKQDLLE------KLEL---RNLETTVNEQLGGIEAS 869
Fly 870 WSEEEWDQQEEDVKFESMYLSQQLNLPDANVVPHSSTPLRVKPLSKLMFKTLQGDIEEEYHSGME 934
Fly 935 ASELGDNLGRLNSLMNASESKIKATE------RIAP----IPVVD----STIETNHFPAVEESQR 985
Fly 986 STPISIADSSG--ESNHCAVNKNSEIYPMSI--------------DETKVEVKSSLNL---KMHA 1031
Fly 1032 ESIVEDLDIDLDDFLEPMDKELELASQTKGKS-QENIVDHQMEKLEKN-CEQKETAHNNDLDLTD 1094
Fly 1095 EDLKEFLEPMVEEVELMSQKKANDFKDFLEPMP-EELELMSQQKKN---------------ILLP 1143
Fly 1144 STETIK------NSENKNSHEDGSRTVSPDIFGSDSMSPLKPQGKSLAAKLAAKAAAKVLPCPPP 1202
Fly 1203 NSVGLNSPENRKRTNPSIQEKSPS--IFDLYLNRMRGRGRLAKAAE----NLHRI-----TSTNP 1256
Fly 1257 TISVPKDEEDSPIARRPSKRKIVISSDEEEEQKPQIAETQVDCE------SDDYERILDTQMPDP 1315
Fly 1316 RKTPTRPRHKRSKFNSFILDEAEKSGSDHEEEGETTIGTYLKDSMIVSSDDEDHNDTNTHAIYLR 1380
Fly 1381 ALKSPIQRPGAF------------------KMPPPRVFRDESHIFSQPVED------DSSQYMQC 1421
Fly 1422 SFIVDDESSTI 1432 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fancm | NP_001262806.1 | MPH1 | 43..608 | CDD:224036 | 138/754 (18%) |
ResIII | 55..221 | CDD:282678 | 45/185 (24%) | ||
FANCM_ID | 269..378 | CDD:277190 | 22/108 (20%) | ||
Helicase_C | 417..539 | CDD:278689 | 37/185 (20%) | ||
DICER1 | NP_001258211.1 | DEXHc_dicer | 42..239 | CDD:350792 | 48/206 (23%) |
DECH box | 175..178 | 2/2 (100%) | |||
Required for interaction with PRKRA and TARBP2 | 256..595 | 73/393 (19%) | |||
Dicer_PBD | 271..365 | CDD:277191 | 21/127 (17%) | ||
SF2_C_dicer | 372..564 | CDD:350189 | 39/198 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 409..433 | 1/23 (4%) | |||
Dicer_dimer | 630..718 | CDD:397444 | 8/87 (9%) | ||
PAZ_dicer_like | 886..1008 | CDD:239209 | 26/158 (16%) | ||
RIBOc | 1296..>1387 | CDD:197778 | 19/108 (18%) | ||
Rnc | 1666..1918 | CDD:223644 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |