Sequence 1: | NP_001262806.1 | Gene: | Fancm / 42543 | FlyBaseID: | FBgn0038889 | Length: | 1489 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498761.2 | Gene: | dcr-1 / 176138 | WormBaseID: | WBGene00000939 | Length: | 1910 | Species: | Caenorhabditis elegans |
Alignment Length: | 1714 | Identity: | 327/1714 - (19%) |
---|---|---|---|
Similarity: | 567/1714 - (33%) | Gaps: | 580/1714 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 RSYQQTIVQSALFKNTLVVLPTGLGKTFIAAVVM--YNFYRWYP---KGKIVFMAPTR-PLVSQQ 117
Fly 118 -----IHASQKIMPFPSEDTVQLTGQLPRPKRAELWASK----------RVFFATPQ----VVHS 163
Fly 164 DMLEADGECSFPFGSIKLIVVDEAHRAKGR---YAYTQVADCLMARNRYF-RMLALSAT------ 218
Fly 219 -PGRTME------------------------------DVAAVCRNLYISNLQV-RWDTSIDV--- 248
Fly 249 -QPYIHRRTIRTIVVSLKERIKEPRERLLQIIEPYLRQL------MEAEIFKGNKGTVSRNSLLF 306
Fly 307 EQKSFVERSAQGQRHPDHNIIMGNFAMCISMYHSLDLMERHGLRVFVNNFDADDDGREKFVLARD 371
Fly 372 GNLRNLVEQVRQELGANPLDYTTHAMTNGEVPPLPSDLDFGHAKYEKLRQVL--VQHFQANPDSR 434
Fly 435 AIVFCEYR---ESVMLIHRLLLQHRPVLRPRCFVGQGSTVGAS---YALT-----QKQQLQIMTD 488
Fly 489 FRSGTSNVLVATSIGEEGLDVGEVEMIVCFDICSTNP---TRFIQRIGRTGRKKNGEVVMLVTEG 550
Fly 551 REQQVLKDVLANKDQINKKLLN-SSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSA 614
Fly 615 AKTKESRKRKQPVAQTGSLRKYFKESP--------------PTESQQGILQGIKPYQMSEASQQL 665
Fly 666 VKQQVLRRSVTLKNFFGESQAS--------------------STLTSSQEDVQRL---------- 700
Fly 701 -------------------RKLTRLLQSSKPFVSDSKDLMSHLQDDHLPRQIKLYL--------- 737
Fly 738 ------------------LKSNPEFLRETHLKMQV---QSELNIADDRLNSRQRRTKNNYQLLLD 781
Fly 782 IC-------DGMDQ--MNELL-----QGDNSGAEISFRDELNPIYNQS-----PKKFDTICEQIF 827
Fly 828 DGLNEHGLNSNNFELKQDLLEKLELRNLETTVNEQLGGIEASWSE-------------------- 872
Fly 873 --EEWDQQEE--DVKFESMYL-------------------SQQLNLPDANV---------VPHSS 905
Fly 906 -----TP--LRVKPLS-----------KLMFKTLQGDIEEEYHS-------GMEASELGDNLGRL 945
Fly 946 NSLMNASESKIKATERIAPI---------PVVDSTIETNHFPAVEESQRSTPISIAD-------- 993
Fly 994 ---------SSGESNHCA----------VNKNSEIYPMSIDETKVEVKSSLN---LKMHAESI-- 1034
Fly 1035 ----------------------------VEDLDIDLDDFLEPMDKELELASQTKGKSQENIVDHQ 1071
Fly 1072 MEKLEKNCEQKETAHNNDLDLTDEDLK--EFLEPMVEEVELMSQKKANDFKD------------- 1121
Fly 1122 FLEPMPEELELMS---QQKKNI----------------LLPSTETIKNSENKNSHEDGSRTVSPD 1167
Fly 1168 IFGSDSMSPLKPQGKSLAAKLAAKAAAKVLPC------PPPNSVGLNSPENRKRTNPSIQEKSPS 1226
Fly 1227 --IFDLYLNRMRGRGRLAKAAE----NLHRITSTNPTISVPK-------DEEDS--PIARRPSKR 1276
Fly 1277 KIVISSDEEEEQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDEAEKSG 1341
Fly 1342 SDHEEEGETTIGTYLKDSMIVSSD 1365 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fancm | NP_001262806.1 | MPH1 | 43..608 | CDD:224036 | 142/642 (22%) |
ResIII | 55..221 | CDD:282678 | 53/197 (27%) | ||
FANCM_ID | 269..378 | CDD:277190 | 20/114 (18%) | ||
Helicase_C | 417..539 | CDD:278689 | 38/137 (28%) | ||
dcr-1 | NP_498761.2 | DEXDc | 27..183 | CDD:238005 | 48/175 (27%) |
Dicer_PBD | 248..343 | CDD:277191 | 20/113 (18%) | ||
HELICc | <434..498 | CDD:197757 | 19/69 (28%) | ||
Dicer_dimer | 572..659 | CDD:281376 | 12/97 (12%) | ||
PAZ_dicer_like | 836..956 | CDD:239209 | 23/131 (18%) | ||
RIBOc | 1395..1520 | CDD:197778 | 28/147 (19%) | ||
Rnc | 1639..1900 | CDD:223644 | |||
RIBOc | 1659..1824 | CDD:238333 | |||
DSRM | 1834..1894 | CDD:238007 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |