Sequence 1: | NP_001262806.1 | Gene: | Fancm / 42543 | FlyBaseID: | FBgn0038889 | Length: | 1489 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031746242.1 | Gene: | ddx58 / 100495207 | XenbaseID: | XB-GENE-980097 | Length: | 967 | Species: | Xenopus tropicalis |
Alignment Length: | 641 | Identity: | 139/641 - (21%) |
---|---|---|---|
Similarity: | 267/641 - (41%) | Gaps: | 116/641 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 NNLPLRSYQQTIVQSALF-KNTLVVLPTGLGKTFIAAVVMYNFYRWYP---KGKIVFMAPTRPLV 114
Fly 115 SQQIHASQKIMPFPSEDTVQLTGQLPRPKRAE------LWASKRVFFATPQVVHSDMLEADGECS 173
Fly 174 FPFGSI-KLIVVDEAHRAKGRYAYTQVADCLMARNRYFRMLALSAT-PGRTMEDVAAVCRNLYIS 236
Fly 237 NLQVRWDTSIDVQPYIH--RRTIRTIVVSLKERIKEPRERLLQIIEPYLRQLMEAEIFKGNKGTV 299
Fly 300 SRNSL--------------LFEQKSFVERSAQGQRH----------------PDHNIIMGNFAMC 334
Fly 335 ISMYHSLDLMERHGLRVFVNNFDADDDGREKFVLARDGNLRNLVEQVRQELGA-NPLDYTTHAMT 398
Fly 399 NGEVPPLPSDLDFG----HAKYEKLRQVLVQHFQANPDSRAIVFCEYRESVMLIHRLLLQHRPV- 458
Fly 459 --LRPRCFVGQGSTVGASYALTQKQQLQIMTDFR-SGTSNVLVATSIGEEGLDVGEVEMIVCFDI 520
Fly 521 CSTNPTRFIQRIGRTGRKKNGEVVMLVTEGREQQVLKDVLANKDQINKKLLNSSVVKLSLYEQNP 585
Fly 586 RMVPSKFQPKC-----EEKHMEPVAE--EKPKPKSAAKTKESRKRKQPVAQTGSLR 634 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fancm | NP_001262806.1 | MPH1 | 43..608 | CDD:224036 | 132/613 (22%) |
ResIII | 55..221 | CDD:282678 | 45/177 (25%) | ||
FANCM_ID | 269..378 | CDD:277190 | 23/138 (17%) | ||
Helicase_C | 417..539 | CDD:278689 | 35/125 (28%) | ||
ddx58 | XP_031746242.1 | DD | 4..88 | CDD:417479 | |
CARD_2 | 100..190 | CDD:407008 | |||
MPH1 | 276..838 | CDD:224036 | 135/617 (22%) | ||
DEXHc_RIG-I_DDX58 | 277..478 | CDD:350831 | 49/225 (22%) | ||
RLR_C_like | 840..951 | CDD:416942 | 4/20 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |