DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HDG11

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_177479.1 Gene:HDG11 / 843671 AraportID:AT1G73360 Length:722 Species:Arabidopsis thaliana


Alignment Length:137 Identity:36/137 - (26%)
Similarity:53/137 - (38%) Gaps:32/137 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 GSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQ 375
            |||..:|               .:.....|.|  .:....||||..|  .|..||..||..|...
plant     9 GSGSGSG---------------GDGGGSHHHD--GSETDRKKKRYHR--HTAQQIQRLESSFKEC 54

  Fly   376 KYLSPADRDEIAASLGLSNAQVITWFQNRRAK-----QKRDIEELKKDFDSVKVFSAHKSFLENV 435
            .:.....|::::..|||:..|:..||||||.:     ::.|...||.:.|.::        .||:
plant    55 PHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIR--------CENI 111

  Fly   436 NDLSILK 442
            .....||
plant   112 AIREALK 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 19/60 (32%)
HDG11NP_177479.1 Homeodomain 33..88 CDD:459649 21/56 (38%)
START_ArGLABRA2_like 231..456 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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