DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and ATHB13

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_177136.1 Gene:ATHB13 / 843314 AraportID:AT1G69780 Length:294 Species:Arabidopsis thaliana


Alignment Length:230 Identity:58/230 - (25%)
Similarity:88/230 - (38%) Gaps:69/230 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 CCSPRQ----AEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKS 339
            |..|:.    |..|.|.:..||..:.:        ||: ..||:.             |.|.|.|
plant    38 CSLPQDLHGFASFLGKRSPMEGCCDLE--------TGN-NMNGEE-------------DYSDDGS 80

  Fly   340 HLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNR 404
            .:.        :|||:    ....|:..|||.|.....|.|..:.::|.:|||...|:..|||||
plant    81 QMG--------EKKRR----LNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNR 133

  Fly   405 RAKQK-----RDIEELKKDFDSVK----VFSAHKSFL----------ENVNDLSILKK------- 443
            ||:.|     :|.:.||:.||::|    :...|...|          |....:::.|:       
plant   134 RARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNREQTESINLNKETEGSCSN 198

  Fly   444 KPMHESDMVGLAAAAAAAGMVVPVPGSVPMGGAPP 478
            :..:.||.:.|..:.|.     |...|...||.||
plant   199 RSDNSSDNLRLDISTAP-----PSNDSTLTGGHPP 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 21/60 (35%)
ATHB13NP_177136.1 Homeodomain 85..138 CDD:459649 22/56 (39%)
HALZ 140..181 CDD:460477 8/40 (20%)

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