DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and ATML1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_193906.2 Gene:ATML1 / 828263 AraportID:AT4G21750 Length:762 Species:Arabidopsis thaliana


Alignment Length:140 Identity:45/140 - (32%)
Similarity:60/140 - (42%) Gaps:17/140 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 KKSEEQ--PTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQI 365
            |.||..  .|||.:.:.:|...|...|.....:|.||.      :.||. ||||..|  .|..||
plant    19 KNSENDLGITGSHEEDFETKSGAEVTMENPLEEELQDP------NQRPN-KKKRYHR--HTQRQI 74

  Fly   366 FELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEE-----LKKDFDSVKV- 424
            .|||..|....:.....|.|::..|.|...||..||||:|.:.|...|.     ||.:.|.::. 
plant    75 QELESFFKECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKAQHERHENQILKSENDKLRAE 139

  Fly   425 FSAHKSFLEN 434
            .:.:|..|.|
plant   140 NNRYKDALSN 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 20/55 (36%)
ATML1NP_193906.2 Homeodomain 63..118 CDD:459649 22/56 (39%)
START_ArGLABRA2_like 257..480 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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