DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HB-12

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_191748.1 Gene:HB-12 / 825362 AraportID:AT3G61890 Length:235 Species:Arabidopsis thaliana


Alignment Length:110 Identity:35/110 - (31%)
Similarity:58/110 - (52%) Gaps:18/110 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 DIFSNRPQPKKKRK---SRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQN 403
            :|.|.....|||.|   ::..|:..||..||..|..:..|.|..:.::|..|||...||..||||
plant    13 EISSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQN 77

  Fly   404 RRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLS----ILKKK 444
            :||:.|  .::|:|::::::.         |.|:|:    |:||:
plant    78 KRARWK--TKQLEKEYNTLRA---------NYNNLASQFEIMKKE 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 21/58 (36%)
HB-12NP_191748.1 Homeodomain 33..83 CDD:459649 20/49 (41%)
HALZ 85..126 CDD:460477 8/36 (22%)

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