DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HB-1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_186796.1 Gene:HB-1 / 821138 AraportID:AT3G01470 Length:272 Species:Arabidopsis thaliana


Alignment Length:144 Identity:45/144 - (31%)
Similarity:68/144 - (47%) Gaps:11/144 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 KDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSN 394
            :.|..|.:..:.|.|.:...|:|||:    .|..|:..|||.|..:..|.|..:.::|..|||..
plant    46 RPFFSSPEDLYDDDFYDDQLPEKKRR----LTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQP 106

  Fly   395 AQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAA 459
            .||..|||||||:.|  .::|::|:|.:|  |.:...|.|.:  ||:.......|::..|.....
plant   107 RQVAVWFQNRRARWK--TKQLERDYDLLK--STYDQLLSNYD--SIVMDNDKLRSEVTSLTEKLQ 165

  Fly   460 AAGMVV-PVPGSVP 472
            ...... ..||.||
plant   166 GKQETANEPPGQVP 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 22/55 (40%)
HB-1NP_186796.1 Homeodomain 68..121 CDD:459649 24/56 (43%)
HALZ 123..164 CDD:460477 11/44 (25%)

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