DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HB4

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_182018.1 Gene:HB4 / 819100 AraportID:AT2G44910 Length:318 Species:Arabidopsis thaliana


Alignment Length:366 Identity:85/366 - (23%)
Similarity:122/366 - (33%) Gaps:108/366 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 LGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWD 204
            ||:|: |:|.|:    ..||:....|   :.|........:..:.||.....:         .|.
plant    14 LGNSQ-QKEPSL----RLNLMPLTTS---SSSSSFQHMHNQNNNSHPQKIHNI---------SWT 61

  Fly   205 HLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPA--IIASEDGSSERS 267
            ||         |..|.:           .|...|..:.....||...:|.|  .:|..|...|.:
plant    62 HL---------FQSSGI-----------KRTTAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAA 106

  Fly   268 QRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKS------NGDTPLDALFQ 326
            ..||.::    ..|.....|.:....:.|.|...::.|..:..|||.|      |||        
plant   107 VVSSPNS----AVSSLSGNKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGD-------- 159

  Fly   327 MTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLG 391
                              .:|   ||.|.|:     .|...||:.|.....|:|..:..:|..|.
plant   160 ------------------GSR---KKLRLSK-----DQALVLEETFKEHSTLNPKQKLALAKQLN 198

  Fly   392 LSNAQVITWFQNRRAKQKR-----DIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKP---MHE 448
            |...||..|||||||:.|.     |.|.||:..|::.  ..::...:.|::|..||..|   ||.
plant   199 LRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLT--EENRRLQKEVSELRALKLSPHLYMHM 261

  Fly   449 SDMVGL------------AAAAAAAGMVVPVPGSVPMGGAP 477
            :....|            ||...||......|..|   |.|
plant   262 TPPTTLTMCPSCERVSSSAATVTAAPSTTTTPTVV---GRP 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 20/55 (36%)
HB4NP_182018.1 HD-ZIP_N 8..124 CDD:461370 30/150 (20%)
Homeodomain 162..216 CDD:459649 23/61 (38%)
HALZ 218..261 CDD:128634 11/44 (25%)

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