DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HB6

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_565536.1 Gene:HB6 / 816775 AraportID:AT2G22430 Length:311 Species:Arabidopsis thaliana


Alignment Length:192 Identity:48/192 - (25%)
Similarity:76/192 - (39%) Gaps:58/192 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 ERSQRSSSSNGSTECC--------SPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPL 321
            :|...|.|..|....|        |||:....|..:..||.||.::...||              
plant     3 KRLSSSDSVGGLISLCPTTSTDEQSPRRYGGREFQSMLEGYEEEEEAIVEE-------------- 53

  Fly   322 DALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEI 386
                            :.|:.:      .:|||:    .:.:|:..|||.|..:..|.|..:.::
plant    54 ----------------RGHVGL------SEKKRR----LSINQVKALEKNFELENKLEPERKVKL 92

  Fly   387 AASLGLSNAQVITWFQNRRAKQK-----RDIEELKKDFDSVK-----VFSAHKSFLENVNDL 438
            |..|||...||..|||||||:.|     :|...||..:||::     :...::|.|:.::.|
plant    93 AQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKL 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 22/60 (37%)
HB6NP_565536.1 Homeodomain 62..115 CDD:459649 23/56 (41%)
HALZ 117..158 CDD:460477 8/38 (21%)

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