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Protein Alignment lbe and lbx1
DIOPT Version :9
Sequence 1: | NP_524435.2 |
Gene: | lbe / 42542 |
FlyBaseID: | FBgn0011278 |
Length: | 479 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001072559.1 |
Gene: | lbx1 / 780014 |
XenbaseID: | XB-GENE-6455157 |
Length: | 265 |
Species: | Xenopus tropicalis |
Alignment Length: | 194 |
Identity: | 86/194 - (44%) |
Similarity: | 114/194 - (58%) |
Gaps: | 37/194 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 307 EQPTGSGKS-------NGDTPLDALFQMTTKDF--------DESQDKSHLDIFSNRPQPKKKRKS 356
|:|..:|.. :..:||.||.::.:|.| ..::.:..:.||..|..|||:|||
Frog 64 EKPPAAGLPLSSRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKS 128
Fly 357 RTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDS 421
|||||||||:||||||||||||||||||:||..|||:||||||||||||||.|||:||:|.|.:|
Frog 129 RTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVES 193
Fly 422 VKVFSAHKSFLENVNDLSILKKK-------PMHESDMVGLAAAAAAAGMVVPVPGSVPMGGAPP 478
||..| .|.:|.|..:|.|::: ....|..:||: |.:|:..:.|
Frog 194 VKKMS--PSTVEAVLTISELEEETNSVRDDSRSRSPQLGLS-------------GHMPLSPSSP 242
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
107 |
1.000 |
Domainoid score |
I6422 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1472248at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002643 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm9428 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR24336 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R5376 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X3367 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
9 | 9.050 |
|
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