DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Nkx1-1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_035450.1 Gene:Nkx1-1 / 672284 MGIID:109346 Length:440 Species:Mus musculus


Alignment Length:520 Identity:121/520 - (23%)
Similarity:166/520 - (31%) Gaps:197/520 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TMRPASPAESEISVGGAPSPLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAAAA 70
            |..||:|.:    |...|.|.|     .|.|.|.|                      .|.||.|.
Mouse     3 TSGPAAPGD----VPALPPPPP-----GPGSGPAP----------------------PAPAATAR 36

  Fly    71 AAASGLTRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKSFS 135
            ....|  |:.:...|.....||  ....:..:.|.....:.|:|.|.|             .|||
Mouse    37 DTMDG--RAELPIFPRAGVPPL--AASDTVPAVPEGAGAARPAAPPRP-------------TSFS 84

  Fly   136 IADILGHSE--KQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQ 198
            :.|||..::  .:|...|       ||.|......||..             |||..|:...||:
Mouse    85 VLDILDPNKFNSRRRRCV-------LLGPVVPATCAPCA-------------PAACVAVPAASGR 129

  Fly   199 IVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNP--------A 255
                              .|.|.|   :|.||          :|...:....|..|        |
Mouse   130 ------------------SPRAEL---ERRAL----------SAATGVAAAAGAEPTSAGDSYRA 163

  Fly   256 IIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQ---------------KKKS 305
            ..|..:|.|..|.||.:::...|.......|:..::...:|:||.:               ..:.
Mouse   164 DEAEANGYSSGSGRSPTADSEDEAPEDEDEEEAPEVQDAQGTEEPRGGSGGLGARGSGCPGAAEV 228

  Fly   306 EEQP-----------------------TGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNR 347
            |..|                       ||:| |.|.||..|  .:|||   ..:.::..|..|.:
Mouse   229 EASPVDDTAAPGPRGNSPGAPGPPATATGAG-SAGSTPQGA--AVTTK---PKRKRTGSDSKSGK 287

  Fly   348 PQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDI 412
            |     |::|||||..|:..||.:|...:|||..:|..:|.||.|:..||..||||||.|.|   
Mouse   288 P-----RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK--- 344

  Fly   413 EELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPVPGSVPMGGAP 477
                                         |:.|       |...:|...|...|.||:.|..|.|
Mouse   345 -----------------------------KQNP-------GADTSAPTGGGGGPGPGAGPGAGLP 373

  Fly   478  477
            Mouse   374  373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/55 (49%)
Nkx1-1NP_035450.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82 26/126 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..291 31/156 (20%)
Homeodomain 289..345 CDD:459649 28/87 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 342..387 13/71 (18%)

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