DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and hmx3a

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571709.3 Gene:hmx3a / 60310 ZFINID:ZDB-GENE-001020-1 Length:297 Species:Danio rerio


Alignment Length:375 Identity:89/375 - (23%)
Similarity:143/375 - (38%) Gaps:121/375 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 PQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAP-----PASRPIAPSGGLLQP 177
            |:|.|.|.::.:. ..|.|.::|....|..:    |.|   :|||     ..|..::..|.:..|
Zfish     2 PETTQDTCASAKD-SPFFIKNLLNSDSKPSK----PKP---ILAPTKAGLDGSFSLSQVGEINFP 58

  Fly   178 RTEPLDVHPAAAAAMLLPSGQIVRP--------WDHLLGPTMPVRPFIPSALLHYEQRLALDYHR 234
            |.|             ||:.:...|        |.:         |:..||..|        .||
Zfish    59 RFE-------------LPTQRFALPAYLERASAWWY---------PYTLSASAH--------LHR 93

  Fly   235 QLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEE 299
                                         :|.:|::..|:.:|.  :.|.:.:|...:..:..::
Zfish    94 -----------------------------TEAAQKARDSSPTTG--TDRDSPELVLKSDPDAKDD 127

  Fly   300 AQKKKS------EEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRT 358
            ....||      ||..|..||..|.  :|     ..|..|:..||          :|.:|:|:||
Zfish   128 EDDNKSGDEIVLEESDTEDGKKEGS--ID-----DWKKSDDGADK----------KPCRKKKTRT 175

  Fly   359 AFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVK 423
            .|:..|:|:||..|..::|||.::|..:||||.|:..||..||||||.|.||   :|..:.::..
Zfish   176 VFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKR---QLAAELEAAN 237

  Fly   424 VFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPVPGSVPM 473
            :..|....:..|..|       .||:      :|:.:......||.|.|:
Zfish   238 LSHAAAQRIVRVPIL-------YHEN------SASESTNTAGNVPVSQPL 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/55 (49%)
hmx3aNP_571709.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..43 6/25 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..172 20/94 (21%)

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