DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and hoxb10a

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571616.1 Gene:hoxb10a / 58056 ZFINID:ZDB-GENE-000328-2 Length:279 Species:Danio rerio


Alignment Length:276 Identity:67/276 - (24%)
Similarity:111/276 - (40%) Gaps:64/276 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 QPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHF 240
            ||  .|:.: |..:|.....||:...|:...|.||             .:.|..||        .
Zfish    19 QP--SPVQL-PHISACPFTSSGRKEDPFYFTLDPT-------------GQARQPLD--------I 59

  Fly   241 NAQAQLLRHMGMNPAIIASEDGSSERSQRSS----SSNGSTECCSP-----RQAEKLEKLTTQEG 296
            :|.::::..||   ::.:::|...|.|..|.    |.|.:|:..||     ..::.|..|:....
Zfish    60 SAFSRIMTDMG---SLNSADDHRPETSFYSGHKLLSLNTNTDPESPSLSSHSDSQHLHSLSLSAP 121

  Fly   297 SEEAQKK--------KSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKS-HLDIFSNRPQPKK 352
            ..|...|        :|.:.|:...:|..:..:.....::.:..|:.:..: ..|.......|::
Zfish   122 CSETDNKHDMQYLAMESTKYPSQWSESRTNRSIITTLSISQRSKDDIEPNNLQTDFTRGDKTPRE 186

  Fly   353 K-------------------RKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVI 398
            |                   ||.|..::.|||.||||.||:..||:...|.||:.|:.|::.||.
Zfish   187 KTQDVTLENAANGWLSAKAGRKKRCPYSKHQILELEKEFLFNMYLTRERRLEISRSINLTDRQVK 251

  Fly   399 TWFQNRRAKQKRDIEE 414
            .||||||.|.|:...|
Zfish   252 IWFQNRRMKLKKMTRE 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)
hoxb10aNP_571616.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..112 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 167..187 2/19 (11%)
Homeodomain 207..263 CDD:459649 28/55 (51%)

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