DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and hoxb5b

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_571612.2 Gene:hoxb5b / 58052 ZFINID:ZDB-GENE-000823-6 Length:276 Species:Danio rerio


Alignment Length:197 Identity:64/197 - (32%)
Similarity:91/197 - (46%) Gaps:28/197 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 AQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQ----- 301
            |.:..|...|.:|   .|:..:...:.|.::||..|...|...|:..|...:.|..|.||     
Zfish    99 ATSDTLELKGSSP---PSDQSTPTGNSRLTNSNNLTSSNSTHFADTDETNVSSETEEGAQTTTTS 160

  Fly   302 -KKKSEEQPTGSGKSN-GDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQ 364
             .:|.|...|.:...| |.||  .:|....|          |.|..:...|..|| :|||:|.:|
Zfish   161 RTQKQESVATSTTTPNDGQTP--QIFPWMRK----------LHISHDMTGPDGKR-ARTAYTRYQ 212

  Fly   365 IFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHK 429
            ..||||.|.:.:||:...|.|||.:|.||..|:..||||||.|.|:| .:||    |:.:.:|..
Zfish   213 TLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD-NKLK----SMSLATAGS 272

  Fly   430 SF 431
            :|
Zfish   273 AF 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 28/55 (51%)
hoxb5bNP_571612.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..182 23/87 (26%)
Antp-type hexapeptide 183..188 1/4 (25%)
Homeodomain 202..258 CDD:459649 29/56 (52%)

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