Protein Alignment lbe and hoxc9a

DIOPT Version :10

• Sequence 1: NP_524435.2
• Gene: lbe / 42542
• FlyBaseID: FBgn0011278
• Length: 479
• Species: Drosophila melanogaster
• Sequence 2: NP_571603.3
• Gene: hoxc9a / 58043
• ZFINID: ZDB-GENE-000328-5
• Length: 270
• Species: Danio rerio
• Alignment Length: 370
• Identity: 88/370 - (23%)
• Similarity: 115/370 - (31%)
• Gaps: 137/370 - (37%)

  Fly    58 LMQHHAAAAAAAAAAASGLTRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPEPQTNQ 122
            |:.|.:....|:...|:|               |:      ||||.|   ||..|.....|..:.
Zfish    25 LINHESEDVLASRFTATG---------------PI------SSSSRP---TPLVPECADYPSCSF 65

  Fly   123 TTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPA 187
            ..|                           ||......||..|:             ..:..||.
Zfish    66 APK---------------------------PPVFTTSWAPVHSQ-------------SSVVYHPY 90

  Fly   188 AAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGM 252
            .....|....:.||.|   |.|       ||..:                 .|...|...||.|:
Zfish    91 THQPHLGTDSRYVRSW---LEP-------IPGTV-----------------SFPGYAGNSRHYGL 128

  Fly   253 NPAIIASEDGSSERSQRSSSSNGSTEC----CSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSG 313
            .|     :.....|:.....|||.|..    ||.....:.::.|          ...|.:...||
Zfish   129 KP-----DTFQDPRAGDCLGSNGRTYTDYLYCSAVDIREKQQNT----------PSPETESLSSG 178

  Fly   314 KSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRP-----QPKKKRKSRTAFTNHQIFELEKRFL 373
            |.              ||     ||:.||  .|.|     ..:..||.|..:|.:|..||||.||
Zfish   179 KH--------------KD-----DKAELD--PNNPVANWIHARSTRKKRCPYTKYQTLELEKEFL 222

  Fly   374 YQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKD 418
            :..||:...|.|:|..|.|:..||..||||||.|.|:..:| |.|
Zfish   223 FNMYLTRDRRYEVARVLNLTERQVKIWFQNRRMKMKKMNKE-KND 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbe	NP_524435.2	Homeodomain	354..410	CDD:459649	27/55 (49%)
hoxc9a	NP_571603.3	Hox9_act	11..189	CDD:461369	55/290 (19%)
		Homeodomain	203..251	CDD:459649	21/47 (45%)