DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and LOC5667563

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_001688391.3 Gene:LOC5667563 / 5667563 VectorBaseID:AGAMI1_004577 Length:456 Species:Anopheles gambiae


Alignment Length:405 Identity:93/405 - (22%)
Similarity:139/405 - (34%) Gaps:116/405 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LRMSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANL 159
            |.:..|||||   .|.|.|...||   ......:...|.|.  .:.||.|:..:.:.:   |.|.
Mosquito    13 LHLPYSSSEP---PPGPGSTACEP---PIVNRPLSPRKFFE--RLYGHLERDDKRATN---NNNG 66

  Fly   160 LAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHY 224
            .|..:|..:       :.|...:.|..|:....|:.........||...........:.|::...
Mosquito    67 SANGSSDEV-------RDRNVHVTVTKASDPCALIDETHRYHHHDHNSSSNSQKSVSVNSSISSG 124

  Fly   225 EQR--LALDYHRQLQEHFNAQAQL---------------------LRHMGMNPAIIASEDGSSER 266
            ..|  ||:|    ::|..:..|.:                     |||.|:              
Mosquito   125 SPRSSLAVD----IEEDSSQDASIGSPGLQPGGGDHPRQPPAYPPLRHYGI-------------- 171

  Fly   267 SQRSSSSNGSTECCS-------------------PRQAEKLEKL------TTQEGSEEAQKKKSE 306
                 :|:.||.|.|                   |:|:.....|      .||.| :.|.....:
Mosquito   172 -----TSSSSTACASEYPVPTTIGGQCYGFLAVTPQQSSSAGVLPVPAPHLTQPG-DPALVGGLQ 230

  Fly   307 EQPTGSGKSNGDTPLDALFQMT------------TKDF-----DESQDKSHLDIFSNRPQPK--K 352
            .:|     .:|...:...|..|            .:.|     |..|..:.|..|..|.:.|  :
Mosquito   231 HRP-----QHGSMAVSTFFSSTGGAGGGGYGPPSFRPFFGIAHDGPQLPAGLSAFLARRRKKEGR 290

  Fly   353 KRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKK 417
            .|:.||.|::.|...||..|...:|:|...|.|:|..|.||..|:..||||||||.|| ||:.:.
Mosquito   291 PRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEVLKLSETQIKIWFQNRRAKDKR-IEKAQI 354

  Fly   418 DFDSVKVFSAHKSFL 432
            | ...:.|:|....|
Mosquito   355 D-QQYRTFAAVNGLL 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
LOC5667563XP_001688391.3 None

Return to query results.
Submit another query.