DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and gsx2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001020683.1 Gene:gsx2 / 561076 ZFINID:ZDB-GENE-041001-114 Length:242 Species:Danio rerio


Alignment Length:145 Identity:45/145 - (31%)
Similarity:64/145 - (44%) Gaps:18/145 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 STECCSPRQAEKLEKLTTQEGSEEA--QKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDE---- 334
            |:...|||....|.|.......:.|  |:...::.|..:...:|..|:......:..|...    
Zfish    63 SSHIHSPRGGIPLLKGQGFTAGDAAFCQRMAHQQSPALAHPGHGHAPVCTPTSFSVTDPRRYHCL 127

  Fly   335 ---SQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQ 396
               :.|.||:         :..::.|||||:.|:.|||:.|....|||...|.|||..|.||..|
Zfish   128 SLGASDNSHI---------QNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNLSEKQ 183

  Fly   397 VITWFQNRRAKQKRD 411
            |..||||||.|.|::
Zfish   184 VKIWFQNRRVKHKKE 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
gsx2NP_001020683.1 Homeodomain 141..197 CDD:459649 29/55 (53%)

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