DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and meox2a

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:XP_017206696.1 Gene:meox2a / 556898 ZFINID:ZDB-GENE-080613-1 Length:302 Species:Danio rerio


Alignment Length:332 Identity:86/332 - (25%)
Similarity:114/332 - (34%) Gaps:110/332 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 GGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHL-----LGPTMPVRPFIPS-------ALLHY 224
            |.|..|...|..||||.|.     .|   || :||     |..:.|....|.|       .|...
Zfish     7 GCLRSPHAPPQAVHPAFAL-----HG---RP-EHLSSYPDLSSSSPPSTCIVSGYPGEDGGLFGG 62

  Fly   225 EQRLALDYHRQLQEHFNAQAQLLRHMG-----------------MNPAIIASEDGSSERSQRSSS 272
            .|| .|...:|...|.:....|.:..|                 :...|...:.|||:......|
Zfish    63 HQR-GLSVSQQQHHHHHHHHHLAQQGGWHLPQSSSASPSAAGVRLGLGISGPDSGSSDVGPGGPS 126

  Fly   273 SNGST----------ECCSPRQAEKLEKLTTQEGSE---------EAQKKKSEEQPTGSGKSNGD 318
            ...||          ..|.|             |.:         ||:|:.|:.:          
Zfish   127 LCASTPSLGAGVPSGASCVP-------------GGDFGRHTMSPAEAEKRNSKRR---------- 168

  Fly   319 TPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADR 383
                       .|..||||.::....|::|     ||.|||||..||.|||..|.:..||:...|
Zfish   169 -----------SDSSESQDGNYKSDVSSKP-----RKERTAFTKEQIRELEAEFAHHNYLTRLRR 217

  Fly   384 DEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHE 448
            .|||.:|.|:..||..||||||.|.||             |....:..:....:|..:||..:..
Zfish   218 YEIAVNLDLTERQVKVWFQNRRMKWKR-------------VKGGQQGAVAREKELVNVKKGTLLP 269

  Fly   449 SDMVGLA 455
            |:..|:|
Zfish   270 SEFSGIA 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 30/55 (55%)
meox2aXP_017206696.1 Homeodomain 188..244 CDD:459649 30/55 (55%)

Return to query results.
Submit another query.