DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and hmx2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001108570.3 Gene:hmx2 / 555632 ZFINID:ZDB-GENE-080506-2 Length:269 Species:Danio rerio


Alignment Length:250 Identity:65/250 - (26%)
Similarity:96/250 - (38%) Gaps:93/250 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 IASEDGSSERSQRSS---SSNGSTECCSPRQ-------AEKLEKLTTQEG--------------- 296
            ::|||..|.......   |..|..|.|:|.|       |.| ..|..|:|               
Zfish    51 VSSEDDCSAGEDSGDCYCSEPGVPESCNPHQPLNFCLGATK-GLLPVQDGIDRRPHLTPSILPDY 114

  Fly   297 SEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFT 361
            .||..:..|:..|....:.              :|..:.|:.|            .|:|:||.|:
Zfish   115 KEEQGRACSQMSPVSEDRQ--------------RDGPDKQNNS------------AKKKTRTVFS 153

  Fly   362 NHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFS 426
            ..|:::||..|..::|||.::|..:|:||.|:..||.|||||||.|.||   :|..:.::..:  
Zfish   154 RSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKR---QLSAELEAANM-- 213

  Fly   427 AHKS----------FLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPVPGSV 471
            ||.|          |.||    |:|:                      ||||.|:
Zfish   214 AHASAQTLVGMPLVFREN----SLLR----------------------VPVPRSI 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 26/55 (47%)
hmx2NP_001108570.3 Homeodomain 146..202 CDD:459649 26/55 (47%)

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