DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and NKX1-1

DIOPT Version :9

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001277008.1 Gene:NKX1-1 / 54729 HGNCID:24975 Length:448 Species:Homo sapiens


Alignment Length:515 Identity:115/515 - (22%)
Similarity:161/515 - (31%) Gaps:185/515 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PASPAESEISVGGAPS-PLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAAAAAA 72
            |.:|       |..|: |.|.|    |.|.|.|                      .|.||||..|
Human     6 PEAP-------GDIPALPPPPQ----PGSGPAP----------------------PAPAAAAQEA 37

  Fly    73 ASGLTRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPS-PPSAVPEPQTNQTTKSAIEGV----- 131
            ..|                             |...|: |.:..|....:.|..:|.||.     
Human    38 MDG-----------------------------RAELPAFPRAGAPPLAASDTVPAAPEGAGAARP 73

  Fly   132 ------KSFSIADILG----HSEKQREESVSPPPNANLLAPPASRPIAP----SGGLLQPRTEPL 182
                  .|||:.|||.    :|.::|...:.|...| ..||.||.|.||    ||  ..||.|.|
Human    74 AAPLRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPA-ACAPCASAPCAPAPAASG--RPPRAEEL 135

  Fly   183 DVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLL 247
            :....|.|..:..:|         ..|.....||....                .|..:......
Human   136 ERRALAGAGGVGAAG---------AEPPNAGDPFKAGE----------------AETNDTNGYSS 175

  Fly   248 RHMGMNPA------IIASEDGSSERSQRSSSSNGSTE--------------CCSPRQAEKLEKLT 292
            ...|.:|:      :...||...:.:..:.::.|:.|              |....:.:.....|
Human   176 GGGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGAT 240

  Fly   293 TQEGSEEAQKKKS--EEQPTGSGKS---NGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKK 352
            ..|.:....::.|  .:.|.|...:   .|.||     |.|.......:.::..|..|.:|    
Human   241 VDEAAAPGPRENSPVAQGPPGGAAAPGGAGTTP-----QGTATAAKPKRKRTGSDSKSGKP---- 296

  Fly   353 KRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKK 417
             |::|||||..|:..||.:|...:|||..:|..:|.||.|:..||..||||||.|.|        
Human   297 -RRARTAFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK-------- 352

  Fly   418 DFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPVPGSVPMGGAP 477
                                    |:.|       |...:|...|...|.||:.|..|.|
Human   353 ------------------------KQNP-------GADTSAPTGGGGGPGPGAGPGTGLP 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeobox 356..410 CDD:395001 26/53 (49%)
NKX1-1NP_001277008.1 Homeobox 300..352 CDD:278475 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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