DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and NPM1

DIOPT Version :9

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001341935.1 Gene:NPM1 / 4869 HGNCID:7910 Length:294 Species:Homo sapiens


Alignment Length:203 Identity:37/203 - (18%)
Similarity:67/203 - (33%) Gaps:61/203 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 HMGMNPAIIASEDGSSE------------RSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQ 301
            |:.....:...||..||            ..:||:...||      :..:|..||...|..::..
Human   110 HISGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGS------KVPQKKVKLAADEDDDDDD 168

  Fly   302 KKKSEEQPTGSG-------------KSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKK 353
            ::..:|......             ||..|||.            ::..||:.:...::|....:
Human   169 EEDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPA------------KNAQKSNQNGKDSKPSSTPR 221

  Fly   354 RKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLS----------NAQVITWFQN-RRAK 407
            .|.:.:|...     ||.....|  .|:..::|.|.:..|          .|:.|.:.:| .|..
Human   222 SKGQESFKKQ-----EKTPKTPK--GPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMT 279

  Fly   408 QKRDIEEL 415
            .:..|::|
Human   280 DQEAIQDL 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeobox 356..410 CDD:395001 12/64 (19%)
NPM1NP_001341935.1 Required for interaction with SENP3 1..186 14/81 (17%)
Necessary for interaction with APEX1. /evidence=ECO:0000269|PubMed:19188445 1..117 1/6 (17%)
Nucleoplasmin 18..117 CDD:397268 1/6 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..247 27/151 (18%)
Nuclear localization signal. /evidence=ECO:0000255 152..157 1/4 (25%)
Nuclear localization signal. /evidence=ECO:0000255 191..197 2/5 (40%)
Required for nucleolar localization 243..294 9/45 (20%)
NPM1-C 245..291 CDD:406641 9/43 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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