DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and MSX2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_002440.2 Gene:MSX2 / 4488 HGNCID:7392 Length:267 Species:Homo sapiens


Alignment Length:253 Identity:70/253 - (27%)
Similarity:108/253 - (42%) Gaps:49/253 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 PAIIA--------SEDGSSERSQRSSSSNGSTECC-----SPRQAEKLEKLTTQEGSEEAQKKKS 305
            ||::|        :|..:.||..:.||...|.|..     .|::|   ..|..:..|..|..:..
Human    18 PAVVAGPGPGPGGAEGAAEERRVKVSSLPFSVEALMSDKKPPKEA---SPLPAESASAGATLRPL 79

  Fly   306 EEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQP---------------KKKRK 355
            .....|:.:::...||...|:..:...:.|:|.:.......|..|               |..||
Human    80 LLSGHGAREAHSPGPLVKPFETASVKSENSEDGAAWMQEPGRYSPPPRHMSPTTCTLRKHKTNRK 144

  Fly   356 SRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKR----DIEELK 416
            .||.||..|:..||::|..::|||.|:|.|.::||.|:..||..||||||||.||    ::|:||
Human   145 PRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLK 209

  Fly   417 KDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPVPGSVPMG 474
                     .|.|..|.:...|......|:..:.:.|  |:......|:|:|   |:|
Human   210 ---------MAAKPMLPSSFSLPFPISSPLQAASIYG--ASYPFHRPVLPIP---PVG 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
MSX2NP_002440.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 13/55 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..147 5/30 (17%)
Homeodomain 143..199 CDD:459649 29/55 (53%)

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