DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and MSX1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_002439.2 Gene:MSX1 / 4487 HGNCID:7391 Length:303 Species:Homo sapiens


Alignment Length:379 Identity:78/379 - (20%)
Similarity:132/379 - (34%) Gaps:133/379 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GNQNAVVGVAGCTAAACIILYGKQIHKNRKQRPEDEIQY-LISDKKEKRSPKAHVNAVFFNQLRT 73
            ||..|.:|.|...:|:.:        |:|.:..:|.... ..::::|||                
Human   202 GNDWATIGAALGRSASSV--------KDRCRLMKDTCNTGKWTEEEEKR---------------- 242

  Fly    74 LLGIIIPKKWSVENGLLVVIALSLIARSVSDIWMIQNATAIESTIITMNKKQFRTALVKYLSALP 138
             |..::.:..|.|.|       .::.:.||  |     .|:...:.|.::||.|:..:.||:...
Human   243 -LAEVVHELTSTEPG-------DIVTQGVS--W-----AAVAERVGTRSEKQCRSKWLNYLNWKQ 292

  Fly   139 AIAV-------VNNVLKWSIGELKLRFRTNLSQYLYNE---------YLKGFTYYKMSNLDNRIA 187
            :...       :|.:|:  |.||.:....:::..|..|         :|:.    |...:..:||
Human   293 SGGTEWTKEDEINLILR--IAELDVADENDINWDLLAEGWSSVRSPQWLRS----KWWTIKRQIA 351

  Fly   188 NADQL---LTTD-----IDKFCESVTDLYSNICKPLLDIVIYVYRLTTNLGGTTPGILLLYLFFS 244
            |...:   .:||     :|.  |::| |.|...: ..:|:...:...|.    |||..||....|
Human   352 NHKDVSFPASTDSPAASVDS--ETIT-LNSGTLQ-TFEILPSFHLQPTG----TPGTYLLQTSSS 408

  Fly   245 -GVFLTNLRKPTGRLT---------VLEQKLEGE-------------------FRYVNSRLITNS 280
             |:.||....||..|.         ::...|..|                   .:.|.:..||:|
Human   409 QGLPLTLTTNPTVTLAAAAPASPEQIIVHALSPEHLLNTSDNVTVQCHTPRVIIQTVATEDITSS 473

  Fly   281 ---EEI---------------------AFYKGNNREKLTILASFNKLVGHLRKF 310
               ||:                     .|.....|.|:||..|||.  .|:.||
Human   474 LSQEELTVDSDLHSSDFPEPPDALEADTFPDEIPRPKMTIQPSFNN--AHVSKF 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649
MSX1NP_002439.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..55
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..117
PTZ00449 <105..>248 CDD:185628 13/70 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 133..174
Homeodomain 173..229 CDD:459649 8/34 (24%)
Blue background indicates that the domain is not in the aligned region.

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