DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and meox1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001002450.2 Gene:meox1 / 436723 ZFINID:ZDB-GENE-040718-149 Length:253 Species:Danio rerio


Alignment Length:176 Identity:50/176 - (28%)
Similarity:72/176 - (40%) Gaps:46/176 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 STECC--SPRQAEKLEKL--TTQEGSEEAQKKKSEEQPTGSGK----------------SNGDTP 320
            |:.|.  :|....:.::|  .|..|.:..:.:.|..:|.|.|:                :.||..
Zfish    57 SSSCLVPAPHAYPREDRLYPETHSGYQRTEWQFSPCEPRGRGQEPCQGAAEAVGAEMDSAGGDRL 121

  Fly   321 LDALFQMTTKDFD-------ESQDKSHLDIFSNRPQPK--------------KKRKSRTAFTNHQ 364
            ..|:......|:.       :::.||     |.|.:..              |.||.|||||..|
Zfish   122 AGAVTGCLEGDYSPQSVPAVDTEKKS-----SKRKREVTDIQDSSFKADSNCKARKERTAFTKEQ 181

  Fly   365 IFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKR 410
            :.|||..|.:..||:...|.|||.:|.|:..||..||||||.|.||
Zfish   182 LRELEAEFTHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKR 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
meox1NP_001002450.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..158 4/26 (15%)
Homeodomain 171..227 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..253 2/2 (100%)

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