Protein Alignment lbe and ro

DIOPT Version :10

• Sequence 1: NP_524435.2
• Gene: lbe / 42542
• FlyBaseID: FBgn0011278
• Length: 479
• Species: Drosophila melanogaster
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 337
• Identity: 78/337 - (23%)
• Similarity: 116/337 - (34%)
• Gaps: 86/337 - (25%)

  Fly   169 APSGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDY- 232
            :|.|.....|::.||  |.|...:|                ::|.||..|.   .:.:||   |
  Fly    10 SPDGSPGIKRSDSLD--PIANTTIL----------------SVPQRPSSPR---QFFERL---YG 50

  Fly   233 HRQLQEHFNAQAQLLRHMGMNPAIIA--SEDGSSERSQRSSSSNGSTECCS-------------- 281
            |.:.:...|.:..:..|....|....  ..||.|..|...|.|:..|...:
  Fly    51 HLETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYP 115

  Fly   282 --PRQAEKLEKLTTQEGSEEAQKKKSEEQP----TGSGKSN--------GDTPLDALFQMTTKDF 332
              |.|..:..........:...:|.|...|    ...|.:|        ...|.|..|......|
  Fly   116 QHPSQQHQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSAF 180

  Fly   333 DESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQV 397
                      :...|.:..::|:.||.|:..|...||..|...:|:|.:.|.|:|.:|.|:..|:
  Fly   181 ----------LARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQI 235

  Fly   398 ITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAG 462
            ..||||||||.|| ||:.:.| ...:.|.....|:                |.::|.||.....|
  Fly   236 KIWFQNRRAKDKR-IEKAQID-QHYRNFVVANGFM----------------SSIMGQAATTMPPG 282

  Fly   463 MVVPVPGSVPMG 474
               .|.|.|.:|
  Fly   283 ---GVTGGVAVG 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbe	NP_524435.2	Homeodomain	354..410	CDD:459649	24/55 (44%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	22/51 (43%)