DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and Dfd

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:457 Identity:104/457 - (22%)
Similarity:157/457 - (34%) Gaps:158/457 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PPTMRPASPAESEISVGGAPSPLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAA 68
            |.:|.||......::           ||.:||||.|...|.             |..||      
  Fly    77 PHSMHPADMVSDYMA-----------HHHNPHSHSHSHTHS-------------LPHHH------ 111

  Fly    69 AAAAASGLTRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKS 133
            :.:|.||..:::.|....:|           :::.|..|..|.|.|.|..........|.|.:.:
  Fly   112 SNSAISGHHQASAGGYSSNY-----------ANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISA 165

  Fly   134 FSIADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGG-------LL---------------- 175
            .::     ||:         |.|.  ..|.|:.|...:||       :|                
  Fly   166 GAV-----HSD---------PTNG--YGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGY 214

  Fly   176 -------------------QPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSAL 221
                               .|.::.:|        :.|.......|.:..||             
  Fly   215 GGGYGTANGSVGSTHSQGHSPHSQMMD--------LPLQCSSTEPPTNTALG------------- 258

  Fly   222 LHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAE 286
               .|.|.|...::::|...| .|.|:.:||.   :..:|..||....|..              
  Fly   259 ---LQELGLKLEKRIEEAVPA-GQQLQELGMR---LRCDDMGSENDDMSEE-------------- 302

  Fly   287 KLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDES----QDKSHLDIFSN- 346
              ::|......:|.....:::.   .|.|:.|..|.|    .|.|.:..    ..|.|:...:| 
  Fly   303 --DRLMLDRSPDELGSNDNDDD---LGDSDSDEDLMA----ETTDGERIIYPWMKKIHVAGVANG 358

  Fly   347 --RPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQK 409
              :|..:.||: |||:|.|||.||||.|.|.:||:...|.|||.:|.||..|:..||||||.|.|
  Fly   359 SYQPGMEPKRQ-RTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 422

  Fly   410 RD 411
            :|
  Fly   423 KD 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 31/55 (56%)
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 32/56 (57%)

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