DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and lab

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster


Alignment Length:649 Identity:140/649 - (21%)
Similarity:215/649 - (33%) Gaps:243/649 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 HHTHPHSHPH------------------PLQH-PRASTIDLLQQQQLLMQHHAAAAAAAAAAASG 75
            ||.|||::.:                  |.|| |...    |||||   ||............:|
  Fly    13 HHHHPHANAYDGYSTTTASAANASSYFAPQQHQPHLQ----LQQQQ---QHQHLQQPQQHLTYNG 70

  Fly    76 LTRSAVGNLPEDYFHPLKRLRMS---SSSSE-----------------PRDHTPSPPSAVPEPQT 120
            ...|:.||     ::|.::.:::   :||.:                 |..|..||.:|.....|
  Fly    71 YESSSPGN-----YYPQQQAQLTPPPTSSHQVVQQHQQQQQAQQQQLYPHSHLFSPSAAEYGITT 130

  Fly   121 NQTTKSAIEGV----KSFSIADILGHSEKQRE-------ESVSPPPNAN-LLAPPASRP------ 167
            :.||.:  .|.    .|.|.||....|:....       .:|:||.|:: :.|..||..      
  Fly   131 STTTGN--PGTPLHPSSHSPADSYYESDSVHSYYATAAVATVAPPSNSSPITAANASATSNTQQQ 193

  Fly   168 ------IAPSGGLLQPRTEPLD-VHPAAAAAMLLP--SGQIVRPWDHLL----GPTMPVRPFIP- 218
                  |:...|::...   || ::|.|.|...:.  :|||...:..:|    .|.|.:....| 
  Fly   194 QQQAAIISSENGMMYTN---LDCMYPTAQAQAPVHGYAGQIEEKYAAVLHASYAPGMVLEDQDPM 255

  Fly   219 ------SALLHYEQRLALDY------------------------------HR---QLQEHFNAQA 244
                  |.:.|::|.||..|                              |:   |:|:......
  Fly   256 MQQATQSQMWHHQQHLAGSYALDAMDSLGMHAHMHHGLPHGHLGNLANNPHQQQPQVQQQQQQPH 320

  Fly   245 QLLRH-MGMNPAI-------IASEDGSSERSQR-------------SSSSNG----STECCSPRQ 284
            |..:| ...:||.       ..|.:|...|.||             :|:|||    ||:..||..
  Fly   321 QQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSKSPNH 385

  Fly   285 AEKLEKLTTQEGSEEAQKKKSEEQPT------------------------GSGKSNGDTPL---- 321
            :..:......:......|.::.:.|.                        |||..||...:    
  Fly   386 SSSIPTYKWMQLKRNVPKPQAPKLPASGIASMHDYQMNGQLDMCRGGGGGGSGVGNGPVGVGGNG 450

  Fly   322 -----------DALFQMTTK-------------DFDESQDKSHLDIFSNRPQPKKKRKSRTAFTN 362
                       ::|....:.             ........|...:.||     .....||.|||
  Fly   451 SPGIGGVLSVQNSLIMANSAAAAGSAHPNGMGVGLGSGSGLSSCSLSSN-----TNNSGRTNFTN 510

  Fly   363 HQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEE--LKKDFDSVKVF 425
            .|:.||||.|.:.:||:.|.|.|||.:|.|:..||..||||||.|||:.::|  :..|     :.
  Fly   511 KQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQNRRMKQKKRVKEGLIPAD-----IL 570

  Fly   426 SAHKSFLENVNDLSILKKKPMHE--------------SDMVGLAAAAAA-----AGMVVPVPGS 470
            :.|.:        |::.:||..:              ||:.|...|..|     ..|.:..|.|
  Fly   571 TQHST--------SVISEKPPQQQQPQPPELQLKSQGSDLGGNELATGAPSTPTTAMTLTAPTS 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 30/55 (55%)
labNP_476613.1 Homeodomain 505..558 CDD:459649 30/52 (58%)

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