DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and mnx2a

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001009886.2 Gene:mnx2a / 406205 ZFINID:ZDB-GENE-040415-1 Length:309 Species:Danio rerio


Alignment Length:164 Identity:46/164 - (28%)
Similarity:62/164 - (37%) Gaps:51/164 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 FSNRPQP---KKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRR 405
            :|..||.   .|.|:.|||||:.|:.|||.:|...||||...|.|:|.||.|:..||..||||||
Zfish   138 YSGAPQSGLIGKCRRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRR 202

  Fly   406 AKQKR------------------------------------------------DIEELKKDFDSV 422
            .|.||                                                |.||.::..:..
Zfish   203 MKWKRSRKAKEQAAQLETDGCKSGKRGNKPKDLSRCSAHDEDEDLDPEEEAEEDEEEFRRSINVG 267

  Fly   423 KVFSAHKSFLENVNDLSILKKKPMHESDMVGLAA 456
            .....|..||::.:.||........:.|:..:.|
Zfish   268 VSLPRHSDFLQHSSALSYSSHGSYSDDDLEEIGA 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 30/55 (55%)
mnx2aNP_001009886.2 Homeodomain 151..207 CDD:459649 30/55 (55%)

Return to query results.
Submit another query.