DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and emx1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_937787.1 Gene:emx1 / 378964 ZFINID:ZDB-GENE-031007-7 Length:231 Species:Danio rerio


Alignment Length:213 Identity:59/213 - (27%)
Similarity:83/213 - (38%) Gaps:54/213 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 PVRPFIPSALLHYEQRLALDYHRQLQEHFNA-QAQLLRHMGMNPAIIASEDGSSERSQRSSSSNG 275
            |:||            .||.|........|. |:...|.:..||.::.||           :.|.
Zfish    27 PIRP------------TALSYSAPADSFLNGYQSPAGRALYPNPELVFSE-----------TVNH 68

  Fly   276 STECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPL--------DALFQMTTKDF 332
            :.....|.|.          ||...|      .|...|..:.: ||        :..|....:..
Zfish    69 APLSMHPHQL----------GSAPLQ------HPHFFGTQHRE-PLNFYPWVLRNRFFGHRFQGN 116

  Fly   333 DESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQV 397
            |.|||    .:..:.|..:|.::.||||:..|:..||:.|....|:..|:|.::|.||.||..||
Zfish   117 DVSQD----TLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLANSLSLSETQV 177

  Fly   398 ITWFQNRRAKQKRD-IEE 414
            ..||||||.|.||. :||
Zfish   178 KVWFQNRRTKYKRQKLEE 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
emx1NP_937787.1 Homeodomain 134..190 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231 2/3 (67%)

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