DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and vax2

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_919390.1 Gene:vax2 / 373869 ZFINID:ZDB-GENE-030904-8 Length:307 Species:Danio rerio


Alignment Length:231 Identity:66/231 - (28%)
Similarity:99/231 - (42%) Gaps:37/231 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 DGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKK------SEEQPTGSGKSNGDT 319
            ||.:|    ..:..||...|..|..|  .|..|:.|:....:..      |...||.|.:...|.
Zfish    10 DGIAE----DRNHCGSNSLCRDRGRE--SKSRTEVGNRSPVQSSTDTPGTSASTPTSSSEDGHDK 68

  Fly   320 PL----DALFQMTTKD----FDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQK 376
            .|    |...::..:|    ..|......||:  :||     :::||:||..|::.||..|...:
Zfish    69 LLGVDPDYCRRILVRDAKGTIREIVLPKGLDL--DRP-----KRTRTSFTAEQLYRLELEFQRCQ 126

  Fly   377 YLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSIL 441
            |:...:|.|:|..|.||..||..||||||.|||:|   ..||.|  |..|:....|...|.|.:|
Zfish   127 YVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD---QTKDTD--KRSSSTSESLATCNILRLL 186

  Fly   442 KKKPMHESDMVGLAAAAAAAGMVVPVPGSVPMGGAP 477
            :     :..::.:.|......:..|.||:..:.|:|
Zfish   187 E-----QGRLLSVPAPPPNPLLAHPHPGNGSLLGSP 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
vax2NP_919390.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 16/65 (25%)
Homeodomain 104..160 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..175 10/24 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..254 5/21 (24%)

Return to query results.
Submit another query.