DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and HMX3

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001099044.1 Gene:HMX3 / 340784 HGNCID:5019 Length:357 Species:Homo sapiens


Alignment Length:500 Identity:112/500 - (22%)
Similarity:165/500 - (33%) Gaps:213/500 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PPTMRPASPAESEISVGGAPSPLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAA 68
            ||...|.:|.||..|:   .:.|...||..|   |.|...||.          |.....||||||
Human    18 PPPPPPPAPKESPFSI---KNLLNGDHHRPP---PKPQPPPRT----------LFAPASAAAAAA 66

  Fly    69 AAAAASGLTRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPEPQTNQTTKSAIEGVKS 133
            |||||:                                                 .|.|:||...
Human    67 AAAAAA-------------------------------------------------AKGALEGAAG 82

  Fly   134 FSIADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQ 198
            |:::.:                                |.|..||.|                  
Human    83 FALSQV--------------------------------GDLAFPRFE------------------ 97

  Fly   199 IVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPA-------- 255
                              ||:      ||.||..|               ::..:||        
Human    98 ------------------IPA------QRFALPAH---------------YLERSPAWWYPYTLT 123

  Fly   256 ----IIASEDGSSERSQRSSSSNGSTECCSPR------------QAEKLEKLTTQEGSEEAQKKK 304
                .:...:.|.:...|.||....|:..||.            .::..:::..:|...|..||:
Human   124 PAGGHLPRPEASEKALLRDSSPASGTDRDSPEPLLKADPDHKELDSKSPDEIILEESDSEESKKE 188

  Fly   305 SEEQPTGSGKSNG---DTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPK---KKRKSRTAFTNH 363
            .|..|..:|.|.|   .||       ..:|:.:..:.         |:.|   :|:|:||.|:..
Human   189 GEAAPGAAGASVGAAAATP-------GAEDWKKGAES---------PEKKPACRKKKTRTVFSRS 237

  Fly   364 QIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAH 428
            |:|:||..|..::|||.::|..:||||.|:..||..||||||.|.||   :|..:.::..     
Human   238 QVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKR---QLAAELEAAN----- 294

  Fly   429 KSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPVPGSVPM 473
               |.:.....|::...::..:.....|||||||  .|||.|.|:
Human   295 ---LSHAAAQRIVRVPILYHENSAAEGAAAAAAG--APVPVSQPL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/55 (49%)
HMX3NP_001099044.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58 16/55 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 129..229 22/115 (19%)
Homeodomain 228..284 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.