DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and B-H2

DIOPT Version :9

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster


Alignment Length:537 Identity:130/537 - (24%)
Similarity:184/537 - (34%) Gaps:164/537 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SVGGAPSP--------LPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHAAAAAAAAAAAS 74
            |.||..||        |..|||   |.|....||...      ||||...||..||.........
  Fly    87 SGGGRGSPTDSEREQSLVAQHH---HHHQQQQQHHHH------QQQQQQQQHQQAALQQYIVQQQ 142

  Fly    75 GL---TRSAVGNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPE-PQTNQTTKSAIEGVKSFS 135
            .|   .|........:::    |.|.|...:.|..|.|.||..:.. |..:..            
  Fly   143 QLLRFEREREREREREHY----RERHSPPGNNPYAHHPMPPHLLAHFPPAHYA------------ 191

  Fly   136 IADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLDVHPAAAAAMLLPSGQIV 200
               :|...::|:::...|.|:...|.              :.|.|.|..|....      :|...
  Fly   192 ---VLQQQQQQQQQQQHPHPHHLQLE--------------RERLEALHRHGHGL------TGDPA 233

  Fly   201 RPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSE 265
            :...||            |.|.|.:....|  |..:.:..:....:|:.:|.|       .|::.
  Fly   234 QHLSHL------------SHLSHQQHHPHL--HHPMHDERSRSPLMLQQLGGN-------GGNNN 277

  Fly   266 RSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSN-----------GDT 319
            .:..:|||..:....:...|.....:.:...|       |.....|||..|           || 
  Fly   278 NNNNNSSSASNNNNNNNNSASANSNIISGNSS-------SSNNNNGSGNGNMLLGGPGSSISGD- 334

  Fly   320 PLDALFQMTTKDFDESQD----------------------KSHLDIFSNRPQPKKKRKSRTAFTN 362
                  |.:|.|..:|.|                      .|||.:..:    ||:||:|||||:
  Fly   335 ------QASTIDDSDSDDCGGKDDDGDDSMKNGSSANGDSSSHLSLSLS----KKQRKARTAFTD 389

  Fly   363 HQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIE---ELKKDFDSV-- 422
            ||:..|||.|..|||||..||.|:|..|.||:.||.||:||||.|.||...   ||..:..:.  
  Fly   390 HQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNYAA 454

  Fly   423 --KVFSAHKSFLENVNDLSILKKKPMHES-----DMVGLAAAAAAA------------------- 461
              :::.....:|......:....:..|.:     |:....||||||                   
  Fly   455 FQRLYGGATPYLSAWPYAAAAAAQSPHGATPSAIDIYYRQAAAAAAMQKPSLPASYRMYQSSIPP 519

  Fly   462 GMVVP-VPGSVPMGGAP 477
            ||.:| :|...|.|.||
  Fly   520 GMSLPGMPAPPPPGAAP 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeobox 356..410 CDD:395001 32/53 (60%)
B-H2NP_523386.1 Homeobox 384..436 CDD:278475 32/51 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E1_KOG0488
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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