DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXD12

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_067016.3 Gene:HOXD12 / 3238 HGNCID:5135 Length:270 Species:Homo sapiens


Alignment Length:282 Identity:69/282 - (24%)
Similarity:100/282 - (35%) Gaps:79/282 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PNANLLA--PPASRP------------IAPS--------GGLLQP---RTEPLDVHPAAAAAMLL 194
            ||...||  ||.|.|            .||:        ||..||   .:.||.:.|..|..   
Human    31 PNGGQLAALPPISYPRGALPWAATPASCAPAQPAGATAFGGFSQPYLAGSGPLGLQPPTAKD--- 92

  Fly   195 PSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIAS 259
                         ||....:.:.|.|....|:|      .:.:..|..::.|.      ||:.|.
Human    93 -------------GPEEQAKFYAPEAAAGPEER------GRTRPSFAPESSLA------PAVAAL 132

  Fly   260 EDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSG-KSNGDTPLDA 323
            :....:.:....::.|||              |..:|:           |...| |.:...||:.
Human   133 KAAKYDYAGVGRATPGST--------------TLLQGA-----------PCAPGFKDDTKGPLNL 172

  Fly   324 LFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAA 388
            ...:...........|..|.......|.:.||.|..:|..||.|||..||..::::...|.|::.
Human   173 NMTVQAAGVASCLRPSLPDGLPWGAAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSN 237

  Fly   389 SLGLSNAQVITWFQNRRAKQKR 410
            .|.||:.||..||||||.|:||
Human   238 RLNLSDQQVKIWFQNRRMKKKR 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
HOXD12NP_067016.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..122 5/25 (20%)
Homeodomain 203..259 CDD:459649 25/55 (45%)

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