DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and HOXD11

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_067015.2 Gene:HOXD11 / 3237 HGNCID:5134 Length:338 Species:Homo sapiens


Alignment Length:378 Identity:83/378 - (21%)
Similarity:121/378 - (32%) Gaps:152/378 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 HHAAAAAAAAAAA----SGLTRSAV---GNLPEDYFHPLKRLRMSSSSSEPRDHTPSPPSAVPEP 118
            ::|||||||||||    :.:.|..:   |..|:..|          .:.||....|.||......
Human   106 YYAAAAAAAAAAAAAEEAAMQRELLPPAGRRPDVLF----------KAPEPVCAAPGPPHGPAGA 160

  Fly   119 QTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAPPASRPIAPSGGLLQPRTEPLD 183
            .:|..:.....|        ||.....|..|:...||.|....||...|..|.|           
Human   161 ASNFYSAVGRNG--------ILPQGFDQFYEAAPGPPFAGPQPPPPPAPPQPEG----------- 206

  Fly   184 VHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLR 248
                                                                             
Human   207 ----------------------------------------------------------------- 206

  Fly   249 HMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGSG 313
                     |::.|    ..|:.:..|....|:        |.|  .|||   .|.:.|   |||
Human   207 ---------AADKG----DPRTGAGGGGGSPCT--------KAT--PGSE---PKGAAE---GSG 242

  Fly   314 KSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYL 378
            ......|.:|           ..:||     |:...|::.||.|..:|.:||.|||:.|.:..|:
Human   243 GDGEGPPGEA-----------GAEKS-----SSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYI 291

  Fly   379 SPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDFDSVKVFSAHKSF 431
            :...|.:::..|.|::.||..||||||.|:|      |.:.|.::.|:.:..|
Human   292 NKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK------KLNRDRLQYFTGNPLF 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 23/55 (42%)
HOXD11NP_067015.2 DUF3528 26..185 CDD:432284 26/96 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..270 33/211 (16%)
Homeodomain 267..323 CDD:459649 24/61 (39%)

Return to query results.
Submit another query.