DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXD1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_078777.1 Gene:HOXD1 / 3231 HGNCID:5132 Length:328 Species:Homo sapiens


Alignment Length:402 Identity:86/402 - (21%)
Similarity:115/402 - (28%) Gaps:183/402 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 TPSPPSA-----VPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAPPASRP 167
            :||||:|     ||.|...|..:..:||...                             |.:.|
Human    62 SPSPPAAPARPSVPPPAAPQYAQCTLEGAYE-----------------------------PGAAP 97

  Fly   168 IAPSG----------------GLLQPRTEP--LDVHPAAAAAM-----LLPSGQIVRPWDHLLGP 209
            .|.:|                |:|....:.  ..||.|.:|..     .|.|||:          
Human    98 AAAAGGADYGFLGSGPAYDFPGVLGRAADDGGSHVHYATSAVFSGGGSFLLSGQV---------- 152

  Fly   210 TMPVRPFIPSALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAII-ASEDGSSERSQRSSSS 273
                                 ||            ......|..||.: ||.||.....|.:|.:
Human   153 ---------------------DY------------AAFGEPGPFPACLKASADGHPGAFQTASPA 184

  Fly   274 NGSTECCSPRQAEKLEKLTTQEGSEEAQKKKSEEQPTGS-GKSNGDTPLDALFQMTTKDFDESQD 337
            .|:    .|:.......|.....:.|..|.|......|. .:....:|..|:             
Human   185 PGT----YPKSVSPASGLPAAFSTFEWMKVKRNASKKGKLAEYGAASPSSAI------------- 232

  Fly   338 KSHLDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQ 402
                               ||.|:..|:.||||.|.:.|||:.|.|.|||..|.|::.||..|||
Human   233 -------------------RTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQVKIWFQ 278

  Fly   403 NRRAKQKRDIEELKKDFDSVKVFSAHKSFLENVNDLSILKKKPMHESDMVGLAAAAAAAGMVVPV 467
            |||.|||:...|                                      ||.|.|      :||
Human   279 NRRMKQKKRERE--------------------------------------GLLATA------IPV 299

  Fly   468 -PGSVPMGGAPP 478
             |..:|:.|..|
Human   300 APLQLPLSGTTP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 29/55 (53%)
HOXD1NP_078777.1 Antp-type hexapeptide 204..209 1/4 (25%)
Homeodomain 233..286 CDD:459649 29/52 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328 3/7 (43%)

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