DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbe and HOXC10

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_059105.2 Gene:HOXC10 / 3226 HGNCID:5122 Length:342 Species:Homo sapiens


Alignment Length:451 Identity:95/451 - (21%)
Similarity:152/451 - (33%) Gaps:142/451 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLCPPTMRPASPAESEISVGGAPSPLPTQHHTHPHSHPHPLQHPRASTIDLLQQQQLLMQHHA-- 63
            |.||..:.|.|.||...:.||..                  ::.|::        .:.||..:  
Human     1 MTCPRNVTPNSYAEPLAAPGGGE------------------RYSRSA--------GMYMQSGSDF 39

  Fly    64 -AAAAAAAAAASGLTRSAVGNLP--------------EDYFHPLKRLRMSSSSSEPRDHTPSPPS 113
             .........|..|::...|:.|              :.:..|....|:......|......|||
Human    40 NCGVMRGCGLAPSLSKRDEGSSPSLALNTYPSYLSQLDSWGDPKAAYRLEQPVGRPLSSCSYPPS 104

  Fly   114 AVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANLLAPPASR--------PIAP 170
                             ||..::..:  :|.::|.:|   .|.|.|.:.|...        |: |
Human   105 -----------------VKEENVCCM--YSAEKRAKS---GPEAALYSHPLPESCLGEHEVPV-P 146

  Fly   171 SGGLLQPRTEPLDVHPAAAAAMLLPSGQIVRPWDHLLGPTMPVRPFIPSALLHYEQRLALDYHRQ 235
            |.....|....||..|                  |..|......||        |||.:|     
Human   147 SYYRASPSYSALDKTP------------------HCSGANDFEAPF--------EQRASL----- 180

  Fly   236 LQEHFNAQAQLLRHMGMNPAIIASEDGSSERSQRSSSSNGSTECCSPRQAEKLEKLTTQEGS-EE 299
                 |.:|:.|....:...:...|...|:           ::..||.:.:..:.|...:|| .|
Human   181 -----NPRAEHLESPQLGGKVSFPETPKSD-----------SQTPSPNEIKTEQSLAGPKGSPSE 229

  Fly   300 AQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNRPQPKKKRKSRTAFTNHQ 364
            ::|::::...:....|:.:...:...:.||               .|....|..||.|..:|.||
Human   230 SEKERAKAADSSPDTSDNEAKEEIKAENTT---------------GNWLTAKSGRKKRCPYTKHQ 279

  Fly   365 IFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKR-----DIEELKKDFD 420
            ..||||.||:..||:...|.||:.::.|::.||..||||||.|.|:     .|.||..:|:
Human   280 TLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNRENRIRELTSNFN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 27/55 (49%)
HOXC10NP_059105.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 10/45 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..271 16/109 (15%)
Homeodomain 269..325 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.