DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXC8

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_073149.1 Gene:HOXC8 / 3224 HGNCID:5129 Length:242 Species:Homo sapiens


Alignment Length:193 Identity:52/193 - (26%)
Similarity:81/193 - (41%) Gaps:48/193 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 MGMNPAIIASEDGSSERSQRSS--------------SSNG------STECCSPRQAEKL---EKL 291
            :|.:.|::....||:...|.:|              |::|      |..|..  .|.|.   |.|
Human    32 VGRSHALVYGPGGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHG--DASKFYGYEAL 94

  Fly   292 TTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSN--------RP 348
            ..|......|:....:.|  ..||:.:|             :.|:.:.||:..|:        ||
Human    95 PRQSLYGAQQEASVVQYP--DCKSSANT-------------NSSEGQGHLNQNSSPSLMFPWMRP 144

  Fly   349 QPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRD 411
            ....:|..|..::.:|..||||.||:..||:...|.|::.:|||:..||..||||||.|.|::
Human   145 HAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 25/55 (45%)
HOXC8NP_073149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..154 10/52 (19%)
Antp-type hexapeptide 138..143 0/4 (0%)
Homeodomain 150..206 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..242 0/2 (0%)

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