DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXC4

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_055435.2 Gene:HOXC4 / 3221 HGNCID:5126 Length:264 Species:Homo sapiens


Alignment Length:133 Identity:48/133 - (36%)
Similarity:62/133 - (46%) Gaps:18/133 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 QEGSEEAQKKKSEEQPTG-SGKSNGDTPLDALFQMTTKDFDES-----------QDKSHLDIFS- 345
            |.|....:|.:|..:|.. ||.|...:|..........|...|           ..|.|:...: 
Human    85 QAGHHHPEKSQSLCEPAPLSGASASPSPAPPACSQPAPDHPSSAASKQPIVYPWMKKIHVSTVNP 149

  Fly   346 --NRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQ 408
              |..:||   :||||:|..|:.||||.|.|.:||:...|.|||.||.||..|:..||||||.|.
Human   150 NYNGGEPK---RSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKW 211

  Fly   409 KRD 411
            |:|
Human   212 KKD 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 30/55 (55%)
HOXC4NP_055435.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..130 11/44 (25%)
Antp-type hexapeptide 135..140 0/4 (0%)
Homeodomain 157..213 CDD:459649 31/58 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..264 1/1 (100%)

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