DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbe and HOXB1

DIOPT Version :10

Sequence 1:NP_524435.2 Gene:lbe / 42542 FlyBaseID:FBgn0011278 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_002135.2 Gene:HOXB1 / 3211 HGNCID:5111 Length:301 Species:Homo sapiens


Alignment Length:338 Identity:95/338 - (28%)
Similarity:125/338 - (36%) Gaps:96/338 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 RMSSSSSEPR-DHTPSPPSAVPEPQTNQTTKSAIEGVKSFSIADILGHSEKQREESVSPPPNANL 159
            ||:|....|. :..||..||...|  .....|:.:.|.|::       ||.:....:|.|.....
Human     5 RMNSFLEYPLCNRGPSAYSAHSAP--TSFPPSSAQAVDSYA-------SEGRYGGGLSSPAFQQN 60

  Fly   160 LAPPASRPIAPSG-GLLQPRTEPLDVHPAAAA-----AMLLPSGQIVRPWDHLLGPTMPVRPFIP 218
            ...||.:|  ||. |:..|.:.|....|||.:     :...|.||......:          |.|
Human    61 SGYPAQQP--PSTLGVPFPSSAPSGYAPAACSPSYGPSQYYPLGQSEGDGGY----------FHP 113

  Fly   219 SALLHYEQRLALDYHRQLQEHFNAQAQLLRHMGMNPAIIASEDGSSE-RSQRSSSSNGSTECCSP 282
            |:           |..||.             |::....|...|... ..|.....|..|...:|
Human   114 SS-----------YGAQLG-------------GLSDGYGAGGAGPGPYPPQHPPYGNEQTASFAP 154

  Fly   283 RQAEKLEKLTTQEGSEEAQKKKSEEQPTGSGKSNGDTPLDALFQMTTKDFDESQDKSHLDIFSNR 347
            ..|:.|                ||::.|.. .|..:||       |.:.||..:.|        |
Human   155 AYADLL----------------SEDKETPC-PSEPNTP-------TARTFDWMKVK--------R 187

  Fly   348 PQPKKKRKS----------RTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQ 402
            ..||..:.|          ||.||..|:.||||.|.:.||||.|.|.||||:|.|:..||..|||
Human   188 NPPKTAKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQ 252

  Fly   403 NRRAKQ-KRDIEE 414
            |||.|| ||:.||
Human   253 NRRMKQKKREREE 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lbeNP_524435.2 Homeodomain 354..410 CDD:459649 33/66 (50%)
HOXB1NP_002135.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..77 17/67 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..149 4/21 (19%)
Antp-type hexapeptide 179..184 2/4 (50%)
Homeodomain 207..260 CDD:459649 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 254..301 8/12 (67%)

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